Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.58□□□□□ -0.39
Hspg2Q05793 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hspg2Q05793 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.58□□□□□ -0.4
Hspg2Q05793 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Hspg2Q05793 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hspg2Q05793 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Hspg2Q05793 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.58□□□□□ -0.4
Hspg2Q05793 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Hspg2Q05793 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.58□□□□□ -0.4
Hspg2Q05793 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Hspg2Q05793 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hspg2Q05793 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Gm2213-201ENSMUST00000197485 688 ntBASIC12.57□□□□□ -0.4
Hspg2Q05793 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hspg2Q05793 Phf7-203ENSMUST00000226565 1971 ntBASIC12.57□□□□□ -0.4
Hspg2Q05793 Gm11779-201ENSMUST00000118541 368 ntBASIC12.57□□□□□ -0.4
Hspg2Q05793 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.57□□□□□ -0.4
Hspg2Q05793 Gm10175-201ENSMUST00000086013 645 ntBASIC12.57□□□□□ -0.4
Hspg2Q05793 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.56□□□□□ -0.4
Hspg2Q05793 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hspg2Q05793 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hspg2Q05793 Psmb5-202ENSMUST00000227257 622 ntBASIC12.55□□□□□ -0.4
Hspg2Q05793 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.55□□□□□ -0.4
Hspg2Q05793 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hspg2Q05793 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hspg2Q05793 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms