Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SgcbP82349 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.23■□□□□ 0.03
SgcbP82349 Gm7791-201ENSMUST00000219066 539 ntBASIC15.23■□□□□ 0.03
SgcbP82349 Gm9987-201ENSMUST00000069768 567 ntBASIC15.23■□□□□ 0.03
SgcbP82349 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SgcbP82349 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.23■□□□□ 0.03
SgcbP82349 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.23■□□□□ 0.03
SgcbP82349 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SgcbP82349 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.22■□□□□ 0.03
SgcbP82349 Gm17661-201ENSMUST00000170317 270 ntBASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SgcbP82349 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SgcbP82349 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SgcbP82349 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SgcbP82349 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.21■□□□□ 0.03
SgcbP82349 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.21■□□□□ 0.03
SgcbP82349 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Gm13836-201ENSMUST00000121159 501 ntBASIC15.21■□□□□ 0.03
SgcbP82349 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.21■□□□□ 0.03
SgcbP82349 Gm7889-201ENSMUST00000185591 958 ntBASIC15.21■□□□□ 0.03
SgcbP82349 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.21■□□□□ 0.03
SgcbP82349 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SgcbP82349 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SgcbP82349 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SgcbP82349 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
SgcbP82349 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.21■□□□□ 0.02
SgcbP82349 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SgcbP82349 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SgcbP82349 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
SgcbP82349 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.2■□□□□ 0.02
SgcbP82349 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.2■□□□□ 0.02
SgcbP82349 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.2■□□□□ 0.02
SgcbP82349 Gm18959-201ENSMUST00000208954 655 ntBASIC15.2■□□□□ 0.02
SgcbP82349 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SgcbP82349 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms