Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.96■□□□□ 0.15
Six5P70178 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Six5P70178 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.96■□□□□ 0.15
Six5P70178 Gm27463-201ENSMUST00000183569 57 ntBASIC15.96■□□□□ 0.15
Six5P70178 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.96■□□□□ 0.15
Six5P70178 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.96■□□□□ 0.15
Six5P70178 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Six5P70178 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Six5P70178 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Six5P70178 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.95■□□□□ 0.14
Six5P70178 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Six5P70178 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.95■□□□□ 0.14
Six5P70178 Gm37055-201ENSMUST00000191866 133 ntBASIC15.95■□□□□ 0.14
Six5P70178 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.95■□□□□ 0.14
Six5P70178 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.95■□□□□ 0.14
Six5P70178 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Six5P70178 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Six5P70178 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Six5P70178 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Six5P70178 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.94■□□□□ 0.14
Six5P70178 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Six5P70178 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Six5P70178 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Six5P70178 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Six5P70178 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Six5P70178 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Six5P70178 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.93■□□□□ 0.14
Six5P70178 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.93■□□□□ 0.14
Six5P70178 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Six5P70178 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Six5P70178 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Six5P70178 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Six5P70178 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.92■□□□□ 0.14
Six5P70178 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.92■□□□□ 0.14
Six5P70178 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.92■□□□□ 0.14
Six5P70178 Gm7791-201ENSMUST00000219066 539 ntBASIC15.92■□□□□ 0.14
Six5P70178 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six5P70178 Gm5417-201ENSMUST00000079706 384 ntBASIC15.92■□□□□ 0.14
Six5P70178 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms