Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Gm27000-201ENSMUST00000182943 842 ntBASIC16.76■□□□□ 0.27
Lhx1P63006 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lhx1P63006 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lhx1P63006 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lhx1P63006 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.75■□□□□ 0.27
Lhx1P63006 AA414768-201ENSMUST00000121924 1257 ntBASIC16.75■□□□□ 0.27
Lhx1P63006 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Gm26039-201ENSMUST00000158152 144 ntBASIC16.75■□□□□ 0.27
Lhx1P63006 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.75■□□□□ 0.27
Lhx1P63006 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lhx1P63006 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Actl10-202ENSMUST00000226583 1501 ntBASIC16.75■□□□□ 0.27
Lhx1P63006 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lhx1P63006 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
Lhx1P63006 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.74■□□□□ 0.27
Lhx1P63006 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.74■□□□□ 0.27
Lhx1P63006 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Gm25016-201ENSMUST00000158399 131 ntBASIC16.74■□□□□ 0.27
Lhx1P63006 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Lhx1P63006 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.74■□□□□ 0.27
Lhx1P63006 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.74■□□□□ 0.27
Lhx1P63006 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lhx1P63006 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lhx1P63006 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lhx1P63006 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lhx1P63006 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lhx1P63006 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Lhx1P63006 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lhx1P63006 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.73■□□□□ 0.27
Lhx1P63006 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.73■□□□□ 0.27
Lhx1P63006 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Lhx1P63006 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lhx1P63006 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.73■□□□□ 0.27
Lhx1P63006 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lhx1P63006 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lhx1P63006 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lhx1P63006 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lhx1P63006 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Lhx1P63006 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lhx1P63006 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lhx1P63006 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lhx1P63006 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lhx1P63006 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lhx1P63006 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Lhx1P63006 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Lhx1P63006 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lhx1P63006 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms