Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gabra1P62812 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.4□□□□□ -0.1
Gabra1P62812 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.4□□□□□ -0.1
Gabra1P62812 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.4□□□□□ -0.1
Gabra1P62812 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Gabra1P62812 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.4□□□□□ -0.1
Gabra1P62812 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gabra1P62812 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gabra1P62812 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.4□□□□□ -0.1
Gabra1P62812 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gabra1P62812 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.39□□□□□ -0.11
Gabra1P62812 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Gm12821-201ENSMUST00000120022 600 ntBASIC14.39□□□□□ -0.11
Gabra1P62812 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.39□□□□□ -0.11
Gabra1P62812 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 Gm43060-201ENSMUST00000200621 289 ntBASIC14.39□□□□□ -0.11
Gabra1P62812 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.39□□□□□ -0.11
Gabra1P62812 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.39□□□□□ -0.11
Gabra1P62812 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.39□□□□□ -0.11
Gabra1P62812 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.39□□□□□ -0.11
Gabra1P62812 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gabra1P62812 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.38□□□□□ -0.11
Gabra1P62812 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Gabra1P62812 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.38□□□□□ -0.11
Gabra1P62812 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.38□□□□□ -0.11
Gabra1P62812 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gabra1P62812 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gabra1P62812 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Gabra1P62812 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gabra1P62812 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.38□□□□□ -0.11
Gabra1P62812 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gabra1P62812 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gabra1P62812 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms