Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.02■□□□□ -0
Sec61a1P61620 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sec61a1P61620 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.02■□□□□ -0
Sec61a1P61620 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.02■□□□□ -0
Sec61a1P61620 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a1P61620 Gm10812-201ENSMUST00000099864 546 ntBASIC15.02■□□□□ -0
Sec61a1P61620 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a1P61620 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a1P61620 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
Sec61a1P61620 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a1P61620 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a1P61620 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.02□□□□□ -0.01
Sec61a1P61620 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a1P61620 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.01□□□□□ -0.01
Sec61a1P61620 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sec61a1P61620 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.01□□□□□ -0.01
Sec61a1P61620 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sec61a1P61620 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a1P61620 Gm38345-201ENSMUST00000192635 1748 ntBASIC15□□□□□ -0.01
Sec61a1P61620 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sec61a1P61620 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sec61a1P61620 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sec61a1P61620 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Gm5643-201ENSMUST00000117081 966 ntBASIC15□□□□□ -0.01
Sec61a1P61620 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15□□□□□ -0.01
Sec61a1P61620 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Gm22325-201ENSMUST00000158904 308 ntBASIC15□□□□□ -0.01
Sec61a1P61620 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15□□□□□ -0.01
Sec61a1P61620 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15□□□□□ -0.01
Sec61a1P61620 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Sec61a1P61620 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a1P61620 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.99□□□□□ -0.01
Sec61a1P61620 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a1P61620 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms