Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Gm34391-201ENSMUST00000203706 907 ntBASIC20.22■□□□□ 0.83
Rhbdl3P58873 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.22■□□□□ 0.83
Rhbdl3P58873 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rhbdl3P58873 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.21■□□□□ 0.83
Rhbdl3P58873 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.21■□□□□ 0.83
Rhbdl3P58873 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.21■□□□□ 0.83
Rhbdl3P58873 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rhbdl3P58873 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Gm18421-201ENSMUST00000204122 625 ntBASIC20.2■□□□□ 0.82
Rhbdl3P58873 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.2■□□□□ 0.82
Rhbdl3P58873 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rhbdl3P58873 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.2■□□□□ 0.82
Rhbdl3P58873 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.2■□□□□ 0.82
Rhbdl3P58873 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.19■□□□□ 0.82
Rhbdl3P58873 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Gm29707-201ENSMUST00000196325 491 ntBASIC20.19■□□□□ 0.82
Rhbdl3P58873 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.19■□□□□ 0.82
Rhbdl3P58873 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.19■□□□□ 0.82
Rhbdl3P58873 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Gm24589-201ENSMUST00000116692 94 ntBASIC20.18■□□□□ 0.82
Rhbdl3P58873 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.18■□□□□ 0.82
Rhbdl3P58873 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.17■□□□□ 0.82
Rhbdl3P58873 Gm7461-201ENSMUST00000058918 827 ntBASIC20.17■□□□□ 0.82
Rhbdl3P58873 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.17■□□□□ 0.82
Rhbdl3P58873 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rhbdl3P58873 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.16■□□□□ 0.82
Rhbdl3P58873 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms