Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdx1P52946 Gm27463-201ENSMUST00000183569 57 ntBASIC16.88■□□□□ 0.29
Pdx1P52946 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdx1P52946 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.88■□□□□ 0.29
Pdx1P52946 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pdx1P52946 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pdx1P52946 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.87■□□□□ 0.29
Pdx1P52946 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pdx1P52946 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pdx1P52946 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.87■□□□□ 0.29
Pdx1P52946 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Pdx1P52946 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Pdx1P52946 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pdx1P52946 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Pdx1P52946 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.86■□□□□ 0.29
Pdx1P52946 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.86■□□□□ 0.29
Pdx1P52946 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.86■□□□□ 0.29
Pdx1P52946 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pdx1P52946 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pdx1P52946 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.86■□□□□ 0.29
Pdx1P52946 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pdx1P52946 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pdx1P52946 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.85■□□□□ 0.29
Pdx1P52946 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Gm13559-201ENSMUST00000120476 863 ntBASIC16.85■□□□□ 0.29
Pdx1P52946 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.85■□□□□ 0.29
Pdx1P52946 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pdx1P52946 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.85■□□□□ 0.29
Pdx1P52946 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pdx1P52946 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.84■□□□□ 0.29
Pdx1P52946 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Gm43799-201ENSMUST00000201845 579 ntBASIC16.84■□□□□ 0.29
Pdx1P52946 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pdx1P52946 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms