Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rfx3P48381 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfx3P48381 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rfx3P48381 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rfx3P48381 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rfx3P48381 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx3P48381 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Rfx3P48381 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.41■□□□□ 0.06
Rfx3P48381 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.41■□□□□ 0.06
Rfx3P48381 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Gm27011-201ENSMUST00000182352 972 ntBASIC15.41■□□□□ 0.06
Rfx3P48381 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.41■□□□□ 0.06
Rfx3P48381 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.41■□□□□ 0.06
Rfx3P48381 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.41■□□□□ 0.06
Rfx3P48381 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rfx3P48381 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rfx3P48381 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx3P48381 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.4■□□□□ 0.06
Rfx3P48381 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rfx3P48381 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Gm27275-201ENSMUST00000184318 272 ntBASIC15.4■□□□□ 0.06
Rfx3P48381 Mir8112-201ENSMUST00000184382 131 ntBASIC15.4■□□□□ 0.06
Rfx3P48381 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rfx3P48381 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rfx3P48381 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx3P48381 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Rfx3P48381 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfx3P48381 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.39■□□□□ 0.05
Rfx3P48381 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.39■□□□□ 0.05
Rfx3P48381 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rfx3P48381 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Dancr-204ENSMUST00000132389 2347 ntBASIC15.39■□□□□ 0.05
Rfx3P48381 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx3P48381 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx3P48381 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx3P48381 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx3P48381 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx3P48381 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx3P48381 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx3P48381 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms