Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd27P41272 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd27P41272 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd27P41272 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd27P41272 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cd27P41272 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cd27P41272 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.64□□□□□ -0.23
Cd27P41272 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd27P41272 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.63□□□□□ -0.23
Cd27P41272 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.63□□□□□ -0.23
Cd27P41272 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cd27P41272 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.63□□□□□ -0.23
Cd27P41272 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cd27P41272 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd27P41272 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd27P41272 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cd27P41272 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Gm6433-201ENSMUST00000118634 875 ntBASIC13.62□□□□□ -0.23
Cd27P41272 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.62□□□□□ -0.23
Cd27P41272 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
Cd27P41272 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd27P41272 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.62□□□□□ -0.23
Cd27P41272 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.62□□□□□ -0.23
Cd27P41272 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd27P41272 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.62□□□□□ -0.23
Cd27P41272 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cd27P41272 Gm18958-201ENSMUST00000174258 762 ntBASIC13.61□□□□□ -0.23
Cd27P41272 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cd27P41272 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd27P41272 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.61□□□□□ -0.23
Cd27P41272 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.61□□□□□ -0.23
Cd27P41272 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.61□□□□□ -0.23
Cd27P41272 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cd27P41272 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cd27P41272 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cd27P41272 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd27P41272 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cd27P41272 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cd27P41272 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cd27P41272 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd27P41272 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd27P41272 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cd27P41272 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms