Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.79■□□□□ 0.28
Cd9P40240 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.79■□□□□ 0.28
Cd9P40240 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.79■□□□□ 0.28
Cd9P40240 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.79■□□□□ 0.28
Cd9P40240 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Cd9P40240 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.79■□□□□ 0.28
Cd9P40240 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd9P40240 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.78■□□□□ 0.28
Cd9P40240 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Cd9P40240 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.78■□□□□ 0.28
Cd9P40240 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cd9P40240 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cd9P40240 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cd9P40240 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cd9P40240 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.77■□□□□ 0.28
Cd9P40240 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.77■□□□□ 0.28
Cd9P40240 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cd9P40240 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.77■□□□□ 0.28
Cd9P40240 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cd9P40240 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.77■□□□□ 0.28
Cd9P40240 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cd9P40240 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd9P40240 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Cd9P40240 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.76■□□□□ 0.27
Cd9P40240 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.76■□□□□ 0.27
Cd9P40240 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd9P40240 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.76■□□□□ 0.27
Cd9P40240 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Cd9P40240 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cd9P40240 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cd9P40240 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.76■□□□□ 0.27
Cd9P40240 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cd9P40240 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cd9P40240 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Cd9P40240 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cd9P40240 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cd9P40240 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms