Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Vcam1P29533 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcam1P29533 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcam1P29533 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.62■□□□□ 0.73
Vcam1P29533 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vcam1P29533 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.62■□□□□ 0.73
Vcam1P29533 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.62■□□□□ 0.73
Vcam1P29533 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.62■□□□□ 0.73
Vcam1P29533 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vcam1P29533 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcam1P29533 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
Vcam1P29533 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.61■□□□□ 0.73
Vcam1P29533 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vcam1P29533 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vcam1P29533 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vcam1P29533 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.6■□□□□ 0.73
Vcam1P29533 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Gm34391-201ENSMUST00000203706 907 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 Gm18421-201ENSMUST00000204122 625 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.6■□□□□ 0.73
Vcam1P29533 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vcam1P29533 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.6■□□□□ 0.73
Vcam1P29533 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vcam1P29533 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.6■□□□□ 0.73
Vcam1P29533 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
Vcam1P29533 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcam1P29533 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcam1P29533 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcam1P29533 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcam1P29533 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.59■□□□□ 0.73
Vcam1P29533 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.59■□□□□ 0.73
Vcam1P29533 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Vcam1P29533 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.59■□□□□ 0.73
Vcam1P29533 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vcam1P29533 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.59■□□□□ 0.73
Vcam1P29533 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Vcam1P29533 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vcam1P29533 Gm24589-201ENSMUST00000116692 94 ntBASIC19.58■□□□□ 0.72
Vcam1P29533 Gm29707-201ENSMUST00000196325 491 ntBASIC19.58■□□□□ 0.72
Vcam1P29533 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vcam1P29533 Gm7461-201ENSMUST00000058918 827 ntBASIC19.58■□□□□ 0.72
Vcam1P29533 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vcam1P29533 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.58■□□□□ 0.72
Vcam1P29533 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.58■□□□□ 0.72
Vcam1P29533 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vcam1P29533 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.58■□□□□ 0.72
Vcam1P29533 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vcam1P29533 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.57■□□□□ 0.72
Vcam1P29533 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vcam1P29533 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.57■□□□□ 0.72
Vcam1P29533 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Vcam1P29533 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.57■□□□□ 0.72
Vcam1P29533 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Vcam1P29533 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vcam1P29533 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vcam1P29533 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.56■□□□□ 0.72
Vcam1P29533 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.56■□□□□ 0.72
Vcam1P29533 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vcam1P29533 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms