Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cntn1P12960 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.35■□□□□ 0.21
Cntn1P12960 Gm23634-201ENSMUST00000175071 91 ntBASIC16.35■□□□□ 0.21
Cntn1P12960 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.35■□□□□ 0.21
Cntn1P12960 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cntn1P12960 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cntn1P12960 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cntn1P12960 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cntn1P12960 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cntn1P12960 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.34■□□□□ 0.21
Cntn1P12960 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cntn1P12960 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cntn1P12960 Gm7213-201ENSMUST00000215977 950 ntBASIC16.34■□□□□ 0.21
Cntn1P12960 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.34■□□□□ 0.21
Cntn1P12960 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cntn1P12960 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cntn1P12960 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cntn1P12960 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.34■□□□□ 0.21
Cntn1P12960 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cntn1P12960 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cntn1P12960 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cntn1P12960 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cntn1P12960 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cntn1P12960 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Cntn1P12960 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Cntn1P12960 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.33■□□□□ 0.2
Cntn1P12960 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cntn1P12960 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cntn1P12960 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cntn1P12960 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cntn1P12960 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.32■□□□□ 0.2
Cntn1P12960 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.32■□□□□ 0.2
Cntn1P12960 Gm18958-201ENSMUST00000174258 762 ntBASIC16.32■□□□□ 0.2
Cntn1P12960 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.32■□□□□ 0.2
Cntn1P12960 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.32■□□□□ 0.2
Cntn1P12960 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cntn1P12960 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.32■□□□□ 0.2
Cntn1P12960 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cntn1P12960 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cntn1P12960 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
Cntn1P12960 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cntn1P12960 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cntn1P12960 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.31■□□□□ 0.2
Cntn1P12960 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms