Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PrnpP04925 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.68■□□□□ 0.42
PrnpP04925 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PrnpP04925 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PrnpP04925 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.68■□□□□ 0.42
PrnpP04925 Gm27459-201ENSMUST00000184860 107 ntBASIC17.68■□□□□ 0.42
PrnpP04925 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.68■□□□□ 0.42
PrnpP04925 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.68■□□□□ 0.42
PrnpP04925 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PrnpP04925 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PrnpP04925 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.68■□□□□ 0.42
PrnpP04925 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PrnpP04925 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.67■□□□□ 0.42
PrnpP04925 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PrnpP04925 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PrnpP04925 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.67■□□□□ 0.42
PrnpP04925 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.67■□□□□ 0.42
PrnpP04925 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
PrnpP04925 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PrnpP04925 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Grk6-206ENSMUST00000224995 2971 ntBASIC17.67■□□□□ 0.42
PrnpP04925 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PrnpP04925 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.66■□□□□ 0.42
PrnpP04925 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Mir8098-201ENSMUST00000184011 137 ntBASIC17.66■□□□□ 0.42
PrnpP04925 Gm43347-201ENSMUST00000200226 580 ntBASIC17.66■□□□□ 0.42
PrnpP04925 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.66■□□□□ 0.42
PrnpP04925 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.66■□□□□ 0.42
PrnpP04925 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.66■□□□□ 0.42
PrnpP04925 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PrnpP04925 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.65■□□□□ 0.42
PrnpP04925 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.65■□□□□ 0.42
PrnpP04925 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.65■□□□□ 0.42
PrnpP04925 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PrnpP04925 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Gm5864-201ENSMUST00000202263 970 ntBASIC17.64■□□□□ 0.41
PrnpP04925 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PrnpP04925 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PrnpP04925 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
PrnpP04925 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PrnpP04925 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PrnpP04925 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PrnpP04925 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PrnpP04925 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PrnpP04925 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.63■□□□□ 0.41
PrnpP04925 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PrnpP04925 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PrnpP04925 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PrnpP04925 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms