Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Gm7791-201ENSMUST00000219066 539 ntBASIC14.31□□□□□ -0.12
Hoxa3P02831 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hoxa3P02831 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hoxa3P02831 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.3□□□□□ -0.12
Hoxa3P02831 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.3□□□□□ -0.12
Hoxa3P02831 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Hoxa3P02831 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxa3P02831 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Gm6659-201ENSMUST00000174752 547 ntBASIC14.3□□□□□ -0.12
Hoxa3P02831 Gm45058-201ENSMUST00000205810 766 ntBASIC14.3□□□□□ -0.12
Hoxa3P02831 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hoxa3P02831 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.3□□□□□ -0.12
Hoxa3P02831 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hoxa3P02831 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.3□□□□□ -0.12
Hoxa3P02831 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Gm18032-201ENSMUST00000222541 538 ntBASIC14.29□□□□□ -0.12
Hoxa3P02831 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hoxa3P02831 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hoxa3P02831 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa3P02831 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Hoxa3P02831 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hoxa3P02831 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.28□□□□□ -0.12
Hoxa3P02831 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hoxa3P02831 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.27□□□□□ -0.12
Hoxa3P02831 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Hoxa3P02831 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxa3P02831 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Mir5130-201ENSMUST00000175160 84 ntBASIC14.27□□□□□ -0.13
Hoxa3P02831 Gm2274-201ENSMUST00000184539 609 ntBASIC14.27□□□□□ -0.13
Hoxa3P02831 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxa3P02831 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxa3P02831 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms