Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P01734 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.56■□□□□ 0.56
P01734 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Gm22697-201ENSMUST00000175194 63 ntBASIC18.56■□□□□ 0.56
P01734 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P01734 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
P01734 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
P01734 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
P01734 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Gm7213-201ENSMUST00000215977 950 ntBASIC18.55■□□□□ 0.56
P01734 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.55■□□□□ 0.56
P01734 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.55■□□□□ 0.56
P01734 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P01734 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
P01734 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
P01734 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.54■□□□□ 0.56
P01734 Gm27000-201ENSMUST00000182943 842 ntBASIC18.54■□□□□ 0.56
P01734 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.54■□□□□ 0.56
P01734 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
P01734 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01734 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
P01734 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
P01734 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.53■□□□□ 0.56
P01734 Gm18101-201ENSMUST00000215769 548 ntBASIC18.53■□□□□ 0.56
P01734 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
P01734 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01734 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.52■□□□□ 0.56
P01734 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01734 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
P01734 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P01734 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
P01734 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.52■□□□□ 0.55
P01734 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
P01734 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01734 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01734 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01734 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
P01734 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01734 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01734 Gm10013-201ENSMUST00000106074 672 ntBASIC18.51■□□□□ 0.55
P01734 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms