Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Setdb1O88974 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.78■□□□□ 0.92
Setdb1O88974 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.78■□□□□ 0.92
Setdb1O88974 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Setdb1O88974 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.78■□□□□ 0.92
Setdb1O88974 Gm18206-201ENSMUST00000207027 926 ntBASIC20.78■□□□□ 0.92
Setdb1O88974 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Setdb1O88974 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.77■□□□□ 0.92
Setdb1O88974 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Setdb1O88974 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Setdb1O88974 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Setdb1O88974 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.77■□□□□ 0.91
Setdb1O88974 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Setdb1O88974 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.77■□□□□ 0.91
Setdb1O88974 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.77■□□□□ 0.91
Setdb1O88974 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Setdb1O88974 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Setdb1O88974 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.77■□□□□ 0.91
Setdb1O88974 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.77■□□□□ 0.91
Setdb1O88974 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Setdb1O88974 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.76■□□□□ 0.91
Setdb1O88974 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.76■□□□□ 0.91
Setdb1O88974 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Setdb1O88974 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Setdb1O88974 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.76■□□□□ 0.91
Setdb1O88974 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Setdb1O88974 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Setdb1O88974 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Setdb1O88974 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Setdb1O88974 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Setdb1O88974 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Setdb1O88974 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Setdb1O88974 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Setdb1O88974 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Setdb1O88974 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Setdb1O88974 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Setdb1O88974 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
Setdb1O88974 Gm12895-201ENSMUST00000122214 226 ntBASIC20.75■□□□□ 0.91
Setdb1O88974 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Setdb1O88974 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.74■□□□□ 0.91
Setdb1O88974 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.74■□□□□ 0.91
Setdb1O88974 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.74■□□□□ 0.91
Setdb1O88974 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Setdb1O88974 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.74■□□□□ 0.91
Setdb1O88974 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Setdb1O88974 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Setdb1O88974 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Setdb1O88974 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Setdb1O88974 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms