Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.62■□□□□ 0.25
ClppO88696 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.62■□□□□ 0.25
ClppO88696 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.62■□□□□ 0.25
ClppO88696 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ClppO88696 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.62■□□□□ 0.25
ClppO88696 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClppO88696 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
ClppO88696 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Gm10013-201ENSMUST00000106074 672 ntBASIC16.61■□□□□ 0.25
ClppO88696 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.61■□□□□ 0.25
ClppO88696 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ClppO88696 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ClppO88696 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ClppO88696 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClppO88696 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.6■□□□□ 0.25
ClppO88696 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Tgds-204ENSMUST00000228543 1594 ntBASIC16.6■□□□□ 0.25
ClppO88696 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ClppO88696 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ClppO88696 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ClppO88696 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ClppO88696 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ClppO88696 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.6■□□□□ 0.25
ClppO88696 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ClppO88696 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.59■□□□□ 0.25
ClppO88696 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.59■□□□□ 0.25
ClppO88696 Gm18032-201ENSMUST00000222541 538 ntBASIC16.59■□□□□ 0.25
ClppO88696 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ClppO88696 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ClppO88696 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ClppO88696 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.59■□□□□ 0.25
ClppO88696 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ClppO88696 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ClppO88696 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
ClppO88696 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ClppO88696 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ClppO88696 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
ClppO88696 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.58■□□□□ 0.24
ClppO88696 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ClppO88696 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms