Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Gm10418-201ENSMUST00000100943 576 ntBASIC15.19■□□□□ 0.02
Slc28a2O88627 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc28a2O88627 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc28a2O88627 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc28a2O88627 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Slc28a2O88627 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Slc28a2O88627 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.18■□□□□ 0.02
Slc28a2O88627 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc28a2O88627 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc28a2O88627 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a2O88627 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Slc28a2O88627 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.17■□□□□ 0.02
Slc28a2O88627 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.17■□□□□ 0.02
Slc28a2O88627 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc28a2O88627 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.17■□□□□ 0.02
Slc28a2O88627 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a2O88627 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc28a2O88627 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc28a2O88627 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.16■□□□□ 0.02
Slc28a2O88627 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc28a2O88627 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Slc28a2O88627 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Mtag2-201ENSMUST00000058665 714 ntBASIC15.16■□□□□ 0.02
Slc28a2O88627 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.16■□□□□ 0.02
Slc28a2O88627 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a2O88627 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Slc28a2O88627 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.16■□□□□ 0.02
Slc28a2O88627 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.16■□□□□ 0.02
Slc28a2O88627 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Slc28a2O88627 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Slc28a2O88627 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Idnk-204ENSMUST00000226010 1898 ntBASIC15.15■□□□□ 0.02
Slc28a2O88627 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Slc28a2O88627 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.15■□□□□ 0.02
Slc28a2O88627 Gm10138-203ENSMUST00000206952 366 ntBASIC15.15■□□□□ 0.02
Slc28a2O88627 Gm29791-202ENSMUST00000207888 369 ntBASIC15.15■□□□□ 0.02
Slc28a2O88627 Gm20049-201ENSMUST00000219950 730 ntBASIC15.15■□□□□ 0.02
Slc28a2O88627 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Slc28a2O88627 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a2O88627 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a2O88627 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms