Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
SpibO35906 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
SpibO35906 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SpibO35906 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.8■□□□□ 0.6
SpibO35906 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SpibO35906 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SpibO35906 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SpibO35906 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SpibO35906 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.8■□□□□ 0.6
SpibO35906 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.79■□□□□ 0.6
SpibO35906 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Gm18421-201ENSMUST00000204122 625 ntBASIC18.79■□□□□ 0.6
SpibO35906 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SpibO35906 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SpibO35906 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SpibO35906 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.78■□□□□ 0.6
SpibO35906 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.78■□□□□ 0.6
SpibO35906 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.78■□□□□ 0.6
SpibO35906 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.78■□□□□ 0.6
SpibO35906 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SpibO35906 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SpibO35906 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SpibO35906 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.77■□□□□ 0.6
SpibO35906 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SpibO35906 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SpibO35906 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.77■□□□□ 0.6
SpibO35906 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Gm27459-201ENSMUST00000184860 107 ntBASIC18.77■□□□□ 0.6
SpibO35906 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SpibO35906 Gm29707-201ENSMUST00000196325 491 ntBASIC18.77■□□□□ 0.6
SpibO35906 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.77■□□□□ 0.6
SpibO35906 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.77■□□□□ 0.6
SpibO35906 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SpibO35906 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SpibO35906 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.77■□□□□ 0.59
SpibO35906 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.76■□□□□ 0.59
SpibO35906 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SpibO35906 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SpibO35906 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.76■□□□□ 0.59
SpibO35906 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SpibO35906 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpibO35906 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.75■□□□□ 0.59
SpibO35906 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.75■□□□□ 0.59
SpibO35906 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SpibO35906 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpibO35906 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SpibO35906 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SpibO35906 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SpibO35906 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SpibO35906 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SpibO35906 Gm44771-201ENSMUST00000206975 626 ntBASIC18.74■□□□□ 0.59
SpibO35906 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SpibO35906 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.74■□□□□ 0.59
SpibO35906 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.74■□□□□ 0.59
SpibO35906 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms