Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.45■□□□□ 0.86
NpcdF8VQB8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NpcdF8VQB8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.44■□□□□ 0.86
NpcdF8VQB8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Gm12644-201ENSMUST00000119935 606 ntBASIC20.44■□□□□ 0.86
NpcdF8VQB8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.44■□□□□ 0.86
NpcdF8VQB8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
NpcdF8VQB8 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.44■□□□□ 0.86
NpcdF8VQB8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NpcdF8VQB8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NpcdF8VQB8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Gm6736-201ENSMUST00000166583 948 ntBASIC20.43■□□□□ 0.86
NpcdF8VQB8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Gm6376-201ENSMUST00000209407 580 ntBASIC20.43■□□□□ 0.86
NpcdF8VQB8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NpcdF8VQB8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.42■□□□□ 0.86
NpcdF8VQB8 Gm27702-201ENSMUST00000184512 56 ntBASIC20.42■□□□□ 0.86
NpcdF8VQB8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.42■□□□□ 0.86
NpcdF8VQB8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NpcdF8VQB8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.41■□□□□ 0.86
NpcdF8VQB8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Mir5131-201ENSMUST00000175426 93 ntBASIC20.41■□□□□ 0.86
NpcdF8VQB8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NpcdF8VQB8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Gm2756-201ENSMUST00000195851 400 ntBASIC20.4■□□□□ 0.86
NpcdF8VQB8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Gm6296-201ENSMUST00000222599 943 ntBASIC20.4■□□□□ 0.86
NpcdF8VQB8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NpcdF8VQB8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NpcdF8VQB8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
NpcdF8VQB8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms