Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.58□□□□□ -0.88
Herc1E9PZP8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Herc1E9PZP8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm45331-201ENSMUST00000209868 554 ntBASIC9.58□□□□□ -0.88
Herc1E9PZP8 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.58□□□□□ -0.88
Herc1E9PZP8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc1E9PZP8 Gm12490-201ENSMUST00000120255 560 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm8602-201ENSMUST00000184045 607 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm12151-201ENSMUST00000121374 290 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm37025-201ENSMUST00000195159 829 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Gm9794-201ENSMUST00000202370 423 ntBASIC9.57□□□□□ -0.88
Herc1E9PZP8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc1E9PZP8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm37584-201ENSMUST00000193595 1290 ntBASIC9.56□□□□□ -0.88
Herc1E9PZP8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.56□□□□□ -0.88
Herc1E9PZP8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.56□□□□□ -0.88
Herc1E9PZP8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm6277-202ENSMUST00000224036 2779 ntBASIC9.56□□□□□ -0.88
Herc1E9PZP8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gm17968-201ENSMUST00000194902 784 ntBASIC9.56□□□□□ -0.88
Herc1E9PZP8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc1E9PZP8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Herc1E9PZP8 Mir1895-201ENSMUST00000122615 79 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms