Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC23.96■■□□□ 1.43
Hfm1D3Z4R1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC23.96■■□□□ 1.43
Hfm1D3Z4R1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hfm1D3Z4R1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Hfm1D3Z4R1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hfm1D3Z4R1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Hfm1D3Z4R1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Hfm1D3Z4R1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC23.95■■□□□ 1.43
Hfm1D3Z4R1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Hfm1D3Z4R1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Gm27702-201ENSMUST00000184512 56 ntBASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Gm5264-201ENSMUST00000190584 848 ntBASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hfm1D3Z4R1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hfm1D3Z4R1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 AC159093.1-201ENSMUST00000227779 380 ntBASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Gm25990-201ENSMUST00000102440 86 ntBASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Gm2213-201ENSMUST00000197485 688 ntBASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 Psmb5-202ENSMUST00000227257 622 ntBASIC23.93■■□□□ 1.42
Hfm1D3Z4R1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hfm1D3Z4R1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Gm42670-201ENSMUST00000201816 1292 ntBASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.91■■□□□ 1.42
Hfm1D3Z4R1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Gm7230-201ENSMUST00000173026 815 ntBASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hfm1D3Z4R1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Iqck-206ENSMUST00000208658 2891 ntBASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Hfm1D3Z4R1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Hfm1D3Z4R1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hfm1D3Z4R1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hfm1D3Z4R1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC23.89■■□□□ 1.41
Hfm1D3Z4R1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Hfm1D3Z4R1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms