Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usf3B2RUQ2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usf3B2RUQ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usf3B2RUQ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usf3B2RUQ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Gm12085-201ENSMUST00000119263 940 ntBASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usf3B2RUQ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Gm10418-201ENSMUST00000100943 576 ntBASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Mir2861-201ENSMUST00000175539 82 ntBASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Gm18959-201ENSMUST00000208954 655 ntBASIC14.19□□□□□ -0.14
Usf3B2RUQ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.19□□□□□ -0.14
Usf3B2RUQ2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usf3B2RUQ2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm18032-201ENSMUST00000222541 538 ntBASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm14859-201ENSMUST00000117752 357 ntBASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gm45058-201ENSMUST00000205810 766 ntBASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usf3B2RUQ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usf3B2RUQ2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usf3B2RUQ2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usf3B2RUQ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms