Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shroom2A2ALU4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Gm44945-201ENSMUST00000206764 1187 ntBASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Shroom2A2ALU4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Shroom2A2ALU4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Shroom2A2ALU4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Shroom2A2ALU4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC26.95■■□□□ 1.91
Shroom2A2ALU4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Shroom2A2ALU4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC26.95■■□□□ 1.9
Shroom2A2ALU4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Shroom2A2ALU4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shroom2A2ALU4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shroom2A2ALU4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shroom2A2ALU4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Gm44450-201ENSMUST00000199528 114 ntBASIC26.91■■□□□ 1.9
Shroom2A2ALU4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shroom2A2ALU4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Gm29707-201ENSMUST00000196325 491 ntBASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Shroom2A2ALU4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Gm7222-201ENSMUST00000117512 906 ntBASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Gm25745-201ENSMUST00000174945 133 ntBASIC26.89■■□□□ 1.9
Shroom2A2ALU4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Phf7-203ENSMUST00000226565 1971 ntBASIC26.89■■□□□ 1.9
Shroom2A2ALU4 CT025535.1-201ENSMUST00000227172 491 ntBASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC26.89■■□□□ 1.9
Shroom2A2ALU4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Shroom2A2ALU4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Shroom2A2ALU4 Mir8112-201ENSMUST00000184382 131 ntBASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms