Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.7■□□□□ 0.1
Scn2aA0A0J9YTW6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn2aA0A0J9YTW6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm10013-201ENSMUST00000106074 672 ntBASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2aA0A0J9YTW6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm7977-201ENSMUST00000193787 748 ntBASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2aA0A0J9YTW6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Scn2aA0A0J9YTW6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2aA0A0J9YTW6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2aA0A0J9YTW6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2aA0A0J9YTW6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2aA0A0J9YTW6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms