Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13n-4A0A0G2JG01 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13n-4A0A0G2JG01 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13n-4A0A0G2JG01 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13n-4A0A0G2JG01 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13n-4A0A0G2JG01 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm43183-201ENSMUST00000200632 547 ntBASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm10138-203ENSMUST00000206952 366 ntBASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13n-4A0A0G2JG01 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm30025-201ENSMUST00000218555 728 ntBASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13n-4A0A0G2JG01 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms