Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Gm21814-202ENSMUST00000203277 873 ntBASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-4A0A075B6B4 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.15□□□□□ -0.31
Trav6-4A0A075B6B4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-4A0A075B6B4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-4A0A075B6B4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.15□□□□□ -0.31
Trav6-4A0A075B6B4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Gm7638-201ENSMUST00000121348 967 ntBASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Gm3375-201ENSMUST00000203929 796 ntBASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Gm5417-201ENSMUST00000079706 384 ntBASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-4A0A075B6B4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Gm17661-201ENSMUST00000170317 270 ntBASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Gm27463-201ENSMUST00000183569 57 ntBASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Gm9731-201ENSMUST00000209480 747 ntBASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-4A0A075B6B4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Gm37055-201ENSMUST00000191866 133 ntBASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-4A0A075B6B4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-4A0A075B6B4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms