Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6d-7A0A075B6B0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-7A0A075B6B0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-7A0A075B6B0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm11927-201ENSMUST00000118472 759 ntBASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-7A0A075B6B0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-7A0A075B6B0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-7A0A075B6B0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms