Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.99□□□□□ -0.17
Trav18A0A075B656 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.99□□□□□ -0.17
Trav18A0A075B656 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav18A0A075B656 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.98□□□□□ -0.17
Trav18A0A075B656 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Gm18025-201ENSMUST00000221733 862 ntBASIC13.98□□□□□ -0.17
Trav18A0A075B656 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav18A0A075B656 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.98□□□□□ -0.17
Trav18A0A075B656 Haglr-201ENSMUST00000100000 2085 ntBASIC13.98□□□□□ -0.17
Trav18A0A075B656 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav18A0A075B656 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav18A0A075B656 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.97□□□□□ -0.17
Trav18A0A075B656 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav18A0A075B656 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.96□□□□□ -0.17
Trav18A0A075B656 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav18A0A075B656 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav18A0A075B656 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Gm13216-201ENSMUST00000117145 591 ntBASIC13.95□□□□□ -0.18
Trav18A0A075B656 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav18A0A075B656 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms