Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13-1A0A075B644 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13-1A0A075B644 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13-1A0A075B644 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm7889-201ENSMUST00000185591 958 ntBASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm38027-201ENSMUST00000192315 235 ntBASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm7977-201ENSMUST00000193787 748 ntBASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13-1A0A075B644 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Gm13559-201ENSMUST00000120476 863 ntBASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav13-1A0A075B644 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms