Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav5-1A0A075B5Z7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav5-1A0A075B5Z7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm21559-201ENSMUST00000220638 855 ntBASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm8587-201ENSMUST00000076538 843 ntBASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav5-1A0A075B5Z7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.65□□□□□ -0.06
Trav5-1A0A075B5Z7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 AA414768-201ENSMUST00000121924 1257 ntBASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm25016-201ENSMUST00000158399 131 ntBASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm23634-201ENSMUST00000175071 91 ntBASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-1A0A075B5Z7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-1A0A075B5Z7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms