Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav1A0A075B5Z4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav1A0A075B5Z4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav1A0A075B5Z4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav1A0A075B5Z4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav1A0A075B5Z4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav1A0A075B5Z4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav1A0A075B5Z4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Gm12085-201ENSMUST00000119263 940 ntBASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Gm38027-201ENSMUST00000192315 235 ntBASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav1A0A075B5Z4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm7638-201ENSMUST00000121348 967 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm27000-201ENSMUST00000182943 842 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm29257-201ENSMUST00000186115 639 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Il3ra-202ENSMUST00000223589 738 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.82■□□□□ 0.12
Trav1A0A075B5Z4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav1A0A075B5Z4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav1A0A075B5Z4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms