Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm6025-201ENSMUST00000121517 201 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm23332-201ENSMUST00000157424 275 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm18645-201ENSMUST00000209593 651 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm45730-201ENSMUST00000212560 395 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.27□□□□□ -2.37
Scn11aQ9R053 Gm22489-201ENSMUST00000116813 62 ntBASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm22477-201ENSMUST00000122569 316 ntBASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm24908-201ENSMUST00000157294 127 ntBASIC0.26□□□□□ -2.37
Scn11aQ9R053 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm10038-201ENSMUST00000077233 441 ntBASIC0.26□□□□□ -2.37
Scn11aQ9R053 Gm22829-201ENSMUST00000083771 106 ntBASIC0.26□□□□□ -2.37
Scn11aQ9R053 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Scn11aQ9R053 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm14918-201ENSMUST00000118153 268 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm25333-201ENSMUST00000158035 246 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Mir6341-201ENSMUST00000183490 121 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm27735-201ENSMUST00000185085 76 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm29005-201ENSMUST00000186773 320 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm36956-201ENSMUST00000193830 214 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm43171-201ENSMUST00000199882 291 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.25□□□□□ -2.37
Scn11aQ9R053 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.25□□□□□ -2.37
Scn11aQ9R053 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Scn11aQ9R053 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Scn11aQ9R053 Gm26275-201ENSMUST00000157101 268 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm23170-201ENSMUST00000157158 106 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm24401-201ENSMUST00000157868 91 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm23208-201ENSMUST00000158666 127 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm20409-201ENSMUST00000173457 130 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm44024-201ENSMUST00000203008 476 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm8940-201ENSMUST00000212585 219 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Snora41-201ENSMUST00000082668 132 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm18397-201ENSMUST00000176704 587 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm25596-201ENSMUST00000178368 107 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm29490-201ENSMUST00000190923 342 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm37576-201ENSMUST00000194228 372 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm18113-201ENSMUST00000220630 303 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm10092-201ENSMUST00000077110 180 ntBASIC0.24□□□□□ -2.37
Scn11aQ9R053 Gm25805-201ENSMUST00000122788 108 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm25391-201ENSMUST00000157342 134 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm23897-201ENSMUST00000158110 158 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm22522-201ENSMUST00000158271 151 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Mir7675-201ENSMUST00000184262 58 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm29413-201ENSMUST00000186019 880 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm29134-201ENSMUST00000186579 126 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm29639-201ENSMUST00000188375 580 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm28337-201ENSMUST00000190425 666 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm31123-201ENSMUST00000192094 666 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.23□□□□□ -2.37
Scn11aQ9R053 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 AC154262.1-201ENSMUST00000225976 286 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Mir29c-201ENSMUST00000083614 88 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.23□□□□□ -2.37
Scn11aQ9R053 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm22382-201ENSMUST00000158185 130 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm24549-201ENSMUST00000158647 139 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm29950-201ENSMUST00000195273 237 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm45689-201ENSMUST00000210522 133 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm23407-201ENSMUST00000082538 91 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm23246-201ENSMUST00000083371 67 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm26175-201ENSMUST00000083794 131 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm15312-201ENSMUST00000118827 271 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm15497-201ENSMUST00000119137 551 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm14903-201ENSMUST00000122435 537 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm25332-201ENSMUST00000158038 105 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm22942-201ENSMUST00000158563 124 ntBASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Scn11aQ9R053 Gm23203-201ENSMUST00000104374 107 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm20698-201ENSMUST00000175657 233 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm44976-201ENSMUST00000205543 261 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm44657-201ENSMUST00000208568 450 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms