Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm22352-201ENSMUST00000083917 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm24448-201ENSMUST00000083979 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm22798-201ENSMUST00000083992 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm26427-201ENSMUST00000093648 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm22886-201ENSMUST00000093714 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm22170-201ENSMUST00000097247 107 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.51□□□□□ -2.01
Cpsf3Q9QXK7 Gm650-201ENSMUST00000144428 1551 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm16242-201ENSMUST00000117741 334 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm24937-201ENSMUST00000122597 134 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm26149-201ENSMUST00000157432 108 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm23641-201ENSMUST00000157857 101 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm22891-201ENSMUST00000158641 164 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm24810-201ENSMUST00000175317 70 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm37361-201ENSMUST00000194345 132 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm43669-201ENSMUST00000198229 436 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm22620-201ENSMUST00000082700 133 ntBASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cpsf3Q9QXK7 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm14906-201ENSMUST00000119265 390 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm25318-201ENSMUST00000122554 314 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm2830-201ENSMUST00000140330 385 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm22382-201ENSMUST00000158185 130 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Mir7068-201ENSMUST00000183439 74 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm28825-201ENSMUST00000186233 238 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm43431-201ENSMUST00000198577 340 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm42739-201ENSMUST00000200687 226 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm7065-201ENSMUST00000222150 474 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm23249-201ENSMUST00000083369 161 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm25207-201ENSMUST00000093745 107 ntBASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Cpsf3Q9QXK7 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm26396-201ENSMUST00000104093 132 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm14848-201ENSMUST00000121850 467 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm23586-201ENSMUST00000157657 123 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm24601-201ENSMUST00000157970 143 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm22527-201ENSMUST00000158816 106 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm25162-201ENSMUST00000158906 159 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm26501-201ENSMUST00000178307 107 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Trbv6-201ENSMUST00000193743 276 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm45730-201ENSMUST00000212560 395 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Gm45815-201ENSMUST00000220241 146 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 AC124772.1-201ENSMUST00000221325 151 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Cpsf3Q9QXK7 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm22151-201ENSMUST00000116963 58 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm13903-201ENSMUST00000120945 193 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm23169-201ENSMUST00000157157 112 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm22328-201ENSMUST00000158074 112 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm26180-201ENSMUST00000179942 107 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Mir7093-201ENSMUST00000184195 101 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Trbv7-201ENSMUST00000193339 402 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm38109-201ENSMUST00000195386 181 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm34073-201ENSMUST00000195736 212 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm30155-201ENSMUST00000223458 339 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Snord104-201ENSMUST00000083192 70 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.47□□□□□ -2.01
Cpsf3Q9QXK7 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms