Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25956-201ENSMUST00000175115 217 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm22510-201ENSMUST00000179304 79 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm26336-201ENSMUST00000179449 79 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm26390-201ENSMUST00000179628 79 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Mir6388-201ENSMUST00000184417 75 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm27490-201ENSMUST00000184754 128 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.59□□□□□ -2.15
Trem1Q9JKE2 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Snord38a-201ENSMUST00000083746 71 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.59□□□□□ -2.16
Trem1Q9JKE2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm15719-201ENSMUST00000120619 635 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm13581-201ENSMUST00000120675 278 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm5396-201ENSMUST00000121222 532 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm26345-201ENSMUST00000157534 120 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm22257-201ENSMUST00000158687 301 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm23777-201ENSMUST00000158994 259 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm24816-201ENSMUST00000175311 151 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm25748-201ENSMUST00000175487 70 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm27399-201ENSMUST00000184250 78 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm28151-201ENSMUST00000189404 951 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm37727-201ENSMUST00000191637 819 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm45375-201ENSMUST00000210338 280 ntBASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Trem1Q9JKE2 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm15266-201ENSMUST00000119635 255 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm14366-201ENSMUST00000121970 730 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm15986-201ENSMUST00000122153 400 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm24896-201ENSMUST00000122741 135 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm24627-201ENSMUST00000122764 138 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm24478-201ENSMUST00000157439 158 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm22315-201ENSMUST00000158010 143 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm22075-201ENSMUST00000158599 192 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm27443-201ENSMUST00000184660 98 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm19694-201ENSMUST00000192364 505 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm43587-201ENSMUST00000199590 204 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Gm44655-201ENSMUST00000207768 423 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Trem1Q9JKE2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trem1Q9JKE2 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm14793-201ENSMUST00000118739 311 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm13804-201ENSMUST00000119552 172 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm14785-201ENSMUST00000120185 539 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm14845-201ENSMUST00000121259 306 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm25059-201ENSMUST00000157367 117 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm25224-201ENSMUST00000158195 68 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm23858-201ENSMUST00000158384 106 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm18417-201ENSMUST00000176564 648 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm21737-201ENSMUST00000178112 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm21729-201ENSMUST00000180058 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm21853-201ENSMUST00000180071 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm20901-201ENSMUST00000180177 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm29073-201ENSMUST00000185563 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm29495-201ENSMUST00000189319 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm28090-201ENSMUST00000189458 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm21647-201ENSMUST00000189755 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm29165-201ENSMUST00000190655 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm29211-201ENSMUST00000191470 664 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm36891-201ENSMUST00000191995 655 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm43739-201ENSMUST00000198294 307 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm6796-201ENSMUST00000211919 243 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm25589-201ENSMUST00000082502 166 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm23093-201ENSMUST00000083450 102 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Mir127-201ENSMUST00000093568 70 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.56□□□□□ -2.16
Trem1Q9JKE2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm13059-201ENSMUST00000119881 398 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm15861-201ENSMUST00000120979 339 ntBASIC1.55□□□□□ -2.16
Trem1Q9JKE2 Gm16328-201ENSMUST00000126985 196 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms