Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Gm25142-201ENSMUST00000082698 107 ntBASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Ube3bQ9ES34 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm22472-201ENSMUST00000104115 134 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm26421-201ENSMUST00000104279 132 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm12897-201ENSMUST00000120341 250 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm25464-201ENSMUST00000175481 107 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Mir28a-201ENSMUST00000083560 86 ntBASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ube3bQ9ES34 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Snord89-201ENSMUST00000104516 110 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm26276-201ENSMUST00000157099 109 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm25623-201ENSMUST00000157216 108 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm17161-201ENSMUST00000169187 524 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm27189-201ENSMUST00000184119 190 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 AC134601.1-201ENSMUST00000221058 109 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Mir132-201ENSMUST00000083603 66 ntBASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Ube3bQ9ES34 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm26011-201ENSMUST00000104410 104 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm14402-201ENSMUST00000122217 508 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm26476-201ENSMUST00000122618 313 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm17522-201ENSMUST00000178144 498 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm34139-201ENSMUST00000196166 294 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Snord14d-201ENSMUST00000083424 86 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Svet1-201ENSMUST00000209370 3940 ntBASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ube3bQ9ES34 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm24792-201ENSMUST00000104286 128 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm13831-201ENSMUST00000118764 302 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm22514-201ENSMUST00000122547 308 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm24664-201ENSMUST00000158939 100 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm18429-201ENSMUST00000198707 421 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm24626-201ENSMUST00000082621 161 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm42635-201ENSMUST00000200266 2571 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ube3bQ9ES34 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ube3bQ9ES34 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.59□□□□□ -1.67
Ube3bQ9ES34 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Ube3bQ9ES34 Gm14881-201ENSMUST00000120366 372 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms