Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24338-201ENSMUST00000104205 127 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm14296-202ENSMUST00000108931 750 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm15183-201ENSMUST00000118933 348 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm8260-201ENSMUST00000119230 353 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm12876-201ENSMUST00000120975 408 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm23641-201ENSMUST00000157857 101 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm22654-201ENSMUST00000157874 105 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm24056-201ENSMUST00000158617 146 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm24816-201ENSMUST00000175311 151 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Mir7667-201ENSMUST00000183866 63 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm28418-201ENSMUST00000186179 423 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm42739-201ENSMUST00000200687 226 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm9377-201ENSMUST00000207227 623 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Gm14678-201ENSMUST00000121396 482 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm22534-201ENSMUST00000158173 104 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm7582-201ENSMUST00000160831 603 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm5967-201ENSMUST00000172723 494 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm25121-201ENSMUST00000179846 79 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm27527-201ENSMUST00000183903 99 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm28717-201ENSMUST00000189950 315 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.94□□□□□ -1.94
Trim54Q9ERP3 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm4945-201ENSMUST00000075152 453 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.94□□□□□ -1.94
Trim54Q9ERP3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trim54Q9ERP3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm13329-201ENSMUST00000117063 265 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm15844-201ENSMUST00000118016 576 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm9059-201ENSMUST00000118319 183 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm24908-201ENSMUST00000157294 127 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm24291-201ENSMUST00000157633 162 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm22389-201ENSMUST00000158193 301 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm24681-201ENSMUST00000158760 107 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm16038-201ENSMUST00000159317 193 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Mir8103-201ENSMUST00000183945 107 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Trbv7-201ENSMUST00000193339 402 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm44881-201ENSMUST00000205425 367 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm45288-201ENSMUST00000210236 151 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm26457-201ENSMUST00000082678 78 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm22287-201ENSMUST00000083197 107 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Trim54Q9ERP3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm22270-201ENSMUST00000104034 132 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm13396-201ENSMUST00000120617 271 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm24504-201ENSMUST00000157679 100 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm20462-201ENSMUST00000172623 408 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm22853-201ENSMUST00000174974 131 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm24084-201ENSMUST00000175173 137 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm25284-201ENSMUST00000180345 141 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Mir6346-201ENSMUST00000183982 81 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm27640-201ENSMUST00000184580 147 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm44654-201ENSMUST00000208052 329 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim54Q9ERP3 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm7065-201ENSMUST00000222150 474 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Gm25937-201ENSMUST00000083912 107 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.92□□□□□ -1.94
Trim54Q9ERP3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm24582-201ENSMUST00000103967 103 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm9009-201ENSMUST00000117321 326 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm14073-201ENSMUST00000117344 381 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm24601-201ENSMUST00000157970 143 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm27410-201ENSMUST00000183851 115 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm27786-201ENSMUST00000184337 70 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm32033-201ENSMUST00000193483 339 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm43510-201ENSMUST00000197922 353 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm44811-201ENSMUST00000209120 228 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms