Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Mir223-201ENSMUST00000102112 110 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm14013-201ENSMUST00000119006 270 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm25888-201ENSMUST00000157778 302 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Mir28b-201ENSMUST00000175399 80 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm37438-201ENSMUST00000192813 393 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm43810-201ENSMUST00000201018 232 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm44564-201ENSMUST00000207985 180 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm26328-201ENSMUST00000082821 107 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm24921-201ENSMUST00000083024 107 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Gm25794-201ENSMUST00000083286 107 ntBASIC1.39□□□□□ -2.19
Lima1Q9ERG0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm15659-201ENSMUST00000118881 341 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm14887-201ENSMUST00000119522 663 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm14713-201ENSMUST00000122362 686 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm23429-201ENSMUST00000122486 149 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm25325-201ENSMUST00000122559 86 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm24910-201ENSMUST00000157289 272 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm24768-201ENSMUST00000158512 94 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm25670-201ENSMUST00000178423 107 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm26239-201ENSMUST00000178842 107 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm24267-201ENSMUST00000179841 107 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm42925-201ENSMUST00000197359 285 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm43427-201ENSMUST00000198188 331 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm44128-201ENSMUST00000204909 219 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm19032-201ENSMUST00000208584 592 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm25853-201ENSMUST00000082793 132 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm24292-201ENSMUST00000082888 107 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm26263-201ENSMUST00000083281 164 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm23100-201ENSMUST00000083455 141 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Gm26175-201ENSMUST00000083794 131 ntBASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Lima1Q9ERG0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm26377-201ENSMUST00000102184 108 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm3788-201ENSMUST00000119949 136 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm13588-201ENSMUST00000120026 135 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm15719-201ENSMUST00000120619 635 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm24517-201ENSMUST00000122560 107 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm23619-201ENSMUST00000178411 94 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm25474-201ENSMUST00000179052 94 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm22047-201ENSMUST00000179176 94 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm25936-201ENSMUST00000179952 114 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm24306-201ENSMUST00000180229 79 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Mir7225-201ENSMUST00000184178 54 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm18356-201ENSMUST00000185677 623 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm29817-201ENSMUST00000210098 172 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.37□□□□□ -2.19
Lima1Q9ERG0 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.37□□□□□ -2.19
Lima1Q9ERG0 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm14823-201ENSMUST00000117698 238 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm12351-201ENSMUST00000118727 292 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm14678-201ENSMUST00000121396 482 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm23752-201ENSMUST00000157584 115 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm22338-201ENSMUST00000157715 129 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm25333-201ENSMUST00000158035 246 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm24168-201ENSMUST00000178825 107 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Mir7683-201ENSMUST00000183842 61 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm21064-202ENSMUST00000190583 278 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm37162-201ENSMUST00000191708 551 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm32300-201ENSMUST00000221735 515 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Lima1Q9ERG0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.36□□□□□ -2.19
Lima1Q9ERG0 Gm381-201ENSMUST00000117443 2037 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm12102-201ENSMUST00000118251 604 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm11359-201ENSMUST00000120039 567 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm12304-201ENSMUST00000120312 385 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm23111-201ENSMUST00000122652 105 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms