Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm44128-201ENSMUST00000204909 219 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm45730-201ENSMUST00000212560 395 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm24622-201ENSMUST00000082619 162 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm24381-201ENSMUST00000122697 104 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Gm22768-201ENSMUST00000158366 153 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Gm20477-201ENSMUST00000174028 280 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Gm25949-201ENSMUST00000175333 114 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Gm28408-201ENSMUST00000191557 463 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Mir29c-201ENSMUST00000083614 88 ntBASIC0.35□□□□□ -2.35
Cpsf1Q9EPU4 Gm26074-201ENSMUST00000104063 129 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm16400-201ENSMUST00000116523 1029 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm14364-201ENSMUST00000129209 267 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm24056-201ENSMUST00000158617 146 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm22633-201ENSMUST00000179834 107 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Mir7667-201ENSMUST00000183866 63 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm20832-201ENSMUST00000189076 665 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm36728-201ENSMUST00000195782 665 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm44024-201ENSMUST00000203008 476 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.34□□□□□ -2.36
Cpsf1Q9EPU4 Gm26338-201ENSMUST00000102372 110 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 n-R5s216-201ENSMUST00000122755 112 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Gm21171-201ENSMUST00000180048 673 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Gm42509-201ENSMUST00000197390 781 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Gm45530-201ENSMUST00000211658 225 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.33□□□□□ -2.36
Cpsf1Q9EPU4 Gm23836-201ENSMUST00000104434 129 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Gm6587-201ENSMUST00000120219 613 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Gm15214-201ENSMUST00000122155 470 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Snord11-201ENSMUST00000158468 84 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Gm37568-201ENSMUST00000191755 364 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Gm19147-201ENSMUST00000199622 652 ntBASIC0.32□□□□□ -2.36
Cpsf1Q9EPU4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm26355-201ENSMUST00000158220 105 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm22164-201ENSMUST00000158413 106 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Mir3089-201ENSMUST00000175350 84 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm21815-201ENSMUST00000178213 664 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Mir7675-201ENSMUST00000184262 58 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm28843-201ENSMUST00000189198 678 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm29546-201ENSMUST00000191171 678 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm23932-201ENSMUST00000082914 107 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Mir32-201ENSMUST00000083610 70 ntBASIC0.31□□□□□ -2.36
Cpsf1Q9EPU4 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm42623-201ENSMUST00000197225 379 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 AC127302.1-201ENSMUST00000215973 1111 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm23727-201ENSMUST00000083352 164 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm3867-201ENSMUST00000086108 279 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm11893-201ENSMUST00000117829 491 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm12889-201ENSMUST00000118684 241 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm11606-201ENSMUST00000120706 617 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm37771-201ENSMUST00000193121 265 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm7871-201ENSMUST00000195346 618 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm2628-201ENSMUST00000218019 426 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm26224-201ENSMUST00000082506 80 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Gm22997-201ENSMUST00000082845 107 ntBASIC0.3□□□□□ -2.36
Cpsf1Q9EPU4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm23749-201ENSMUST00000104223 131 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm17100-201ENSMUST00000168963 272 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Mir6419-201ENSMUST00000184784 113 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm37098-201ENSMUST00000192290 244 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm36956-201ENSMUST00000193830 214 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm45387-201ENSMUST00000209792 632 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0.29□□□□□ -2.36
Cpsf1Q9EPU4 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms