Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm24889-201ENSMUST00000104388 132 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm14215-201ENSMUST00000120578 221 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Mir1949-201ENSMUST00000157434 141 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm22556-201ENSMUST00000157803 100 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm23641-201ENSMUST00000157857 101 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm27878-201ENSMUST00000184000 106 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm29640-201ENSMUST00000187972 278 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm37709-201ENSMUST00000195074 600 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm42164-201ENSMUST00000198881 379 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm45071-201ENSMUST00000205353 571 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm44910-201ENSMUST00000208451 396 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Gm22620-201ENSMUST00000082700 133 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Mir10a-201ENSMUST00000083585 110 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Cdc40Q9DC48 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm13885-201ENSMUST00000117569 187 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm23981-201ENSMUST00000157136 106 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm23586-201ENSMUST00000157657 123 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm22668-201ENSMUST00000158716 260 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm20543-201ENSMUST00000174200 726 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Mir7679-201ENSMUST00000183379 63 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm37778-201ENSMUST00000191732 190 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm44881-201ENSMUST00000205425 367 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm44830-201ENSMUST00000207667 584 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm24165-201ENSMUST00000082718 128 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Mir29c-201ENSMUST00000083614 88 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Cdc40Q9DC48 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.66□□□□□ -2.14
Cdc40Q9DC48 Gm23422-201ENSMUST00000102000 107 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Mir3096-201ENSMUST00000116685 71 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm22713-201ENSMUST00000116895 130 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm13432-201ENSMUST00000118861 241 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm12806-201ENSMUST00000119384 268 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm14709-201ENSMUST00000121225 304 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm14638-201ENSMUST00000121338 216 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm25888-201ENSMUST00000157778 302 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm25454-201ENSMUST00000157947 315 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm24656-201ENSMUST00000177548 132 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm24518-201ENSMUST00000180275 94 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm27898-201ENSMUST00000183987 80 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Mir496b-201ENSMUST00000184935 113 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm37869-201ENSMUST00000193385 595 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm37641-201ENSMUST00000193837 239 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm43529-201ENSMUST00000199178 412 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm44282-201ENSMUST00000203199 190 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm44870-201ENSMUST00000207291 357 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm25636-201ENSMUST00000082666 133 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Gm26126-201ENSMUST00000083188 164 ntBASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Cdc40Q9DC48 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm12926-201ENSMUST00000121158 409 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm14530-201ENSMUST00000122391 333 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm23752-201ENSMUST00000157584 115 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm26024-201ENSMUST00000158657 322 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Mir6399-201ENSMUST00000184050 84 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm27490-201ENSMUST00000184754 128 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm18971-201ENSMUST00000197240 374 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm44011-201ENSMUST00000203336 394 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm25813-201ENSMUST00000082748 191 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms