Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm26265-201ENSMUST00000083277 135 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23503-201ENSMUST00000083903 107 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm15309-201ENSMUST00000121644 240 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14530-201ENSMUST00000122391 333 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23752-201ENSMUST00000157584 115 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23586-201ENSMUST00000157657 123 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm11395-201ENSMUST00000181011 499 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm9022-202ENSMUST00000183285 483 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21673-201ENSMUST00000186640 436 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21135-201ENSMUST00000189023 436 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm36984-201ENSMUST00000192770 235 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm26328-201ENSMUST00000082821 107 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25794-201ENSMUST00000083286 107 ntBASIC1.4□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23060-201ENSMUST00000102345 109 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm13457-201ENSMUST00000117885 267 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24198-201ENSMUST00000157812 108 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25454-201ENSMUST00000157947 315 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25020-201ENSMUST00000178071 107 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Zfp950-206ENSMUST00000178819 171 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29603-201ENSMUST00000186792 334 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28917-201ENSMUST00000187294 237 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28766-201ENSMUST00000191086 234 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm9973-202ENSMUST00000220926 166 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.39□□□□□ -2.19
Ccdc3Q9D6Y1 Mir343-201ENSMUST00000102360 75 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14674-201ENSMUST00000117816 342 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14713-201ENSMUST00000122362 686 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm7953-201ENSMUST00000168278 469 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Mir28b-201ENSMUST00000175399 80 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25451-201ENSMUST00000177832 121 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm18356-201ENSMUST00000185677 623 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm37757-201ENSMUST00000193072 210 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm43114-201ENSMUST00000198298 343 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm45232-201ENSMUST00000207811 162 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm32300-201ENSMUST00000221735 515 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm26263-201ENSMUST00000083281 164 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Gm10360-201ENSMUST00000097219 272 ntBASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Ccdc3Q9D6Y1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Mir687-201ENSMUST00000102166 89 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22678-201ENSMUST00000116974 101 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12351-201ENSMUST00000118727 292 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12304-201ENSMUST00000120312 385 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22143-201ENSMUST00000157401 203 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25706-201ENSMUST00000157828 247 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24997-201ENSMUST00000157910 105 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm17113-201ENSMUST00000170118 171 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21737-201ENSMUST00000178112 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21729-201ENSMUST00000180058 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21853-201ENSMUST00000180071 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm20901-201ENSMUST00000180177 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm26652-202ENSMUST00000181672 475 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29073-201ENSMUST00000185563 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29495-201ENSMUST00000189319 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28090-201ENSMUST00000189458 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm21647-201ENSMUST00000189755 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29165-201ENSMUST00000190655 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29211-201ENSMUST00000191470 664 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm36891-201ENSMUST00000191995 655 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms