Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm24172-201ENSMUST00000104127 117 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Snord98-201ENSMUST00000116819 65 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm12697-201ENSMUST00000118008 667 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm14402-201ENSMUST00000122217 508 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm21978-201ENSMUST00000179696 377 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm43669-201ENSMUST00000198229 436 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm45315-201ENSMUST00000209283 333 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Vps28Q9D1C8 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm23627-201ENSMUST00000082459 107 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm22502-201ENSMUST00000082488 107 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm22977-201ENSMUST00000082615 107 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm24149-201ENSMUST00000082757 107 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm26066-201ENSMUST00000083385 109 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm25579-201ENSMUST00000083407 106 ntBASIC2.59□□□□□ -1.99
Vps28Q9D1C8 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.59□□□□□ -2
Vps28Q9D1C8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Vps28Q9D1C8 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Vps28Q9D1C8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Vps28Q9D1C8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Vps28Q9D1C8 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
Vps28Q9D1C8 Mir701-201ENSMUST00000102208 109 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm22782-201ENSMUST00000104082 132 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm24338-201ENSMUST00000104205 127 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm12304-201ENSMUST00000120312 385 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm14269-201ENSMUST00000120455 306 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm25054-201ENSMUST00000157370 97 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm24475-201ENSMUST00000157435 143 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm24816-201ENSMUST00000175311 151 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm20656-201ENSMUST00000176925 518 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Mir6917-201ENSMUST00000184111 61 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm28627-201ENSMUST00000186141 453 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm36953-201ENSMUST00000195295 268 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Vps28Q9D1C8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Vps28Q9D1C8 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.58□□□□□ -2
Vps28Q9D1C8 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Vps28Q9D1C8 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm7164-201ENSMUST00000117503 450 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm12617-201ENSMUST00000121268 381 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm11471-201ENSMUST00000121824 198 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm22654-201ENSMUST00000157874 105 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm22500-201ENSMUST00000158982 99 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm22192-201ENSMUST00000175128 85 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm7837-201ENSMUST00000190873 412 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm44844-201ENSMUST00000207242 336 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm44966-201ENSMUST00000208096 157 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm40810-201ENSMUST00000219149 253 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.57□□□□□ -2
Vps28Q9D1C8 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm26457-201ENSMUST00000082678 78 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Rny3-201ENSMUST00000083011 102 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm25632-201ENSMUST00000083112 85 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.57□□□□□ -2
Vps28Q9D1C8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm25335-201ENSMUST00000158043 103 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm16232-201ENSMUST00000162856 167 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm23191-201ENSMUST00000179147 107 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm9892-201ENSMUST00000182415 992 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm37923-201ENSMUST00000191624 161 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm37054-201ENSMUST00000193481 543 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.56□□□□□ -2
Vps28Q9D1C8 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm45678-201ENSMUST00000210509 295 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm7495-201ENSMUST00000215099 426 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm24623-201ENSMUST00000082616 194 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.56□□□□□ -2
Vps28Q9D1C8 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Vps28Q9D1C8 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm22674-201ENSMUST00000104413 131 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm13672-201ENSMUST00000117554 459 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm14774-201ENSMUST00000117857 536 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm13862-201ENSMUST00000121220 197 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms