Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm44960-201ENSMUST00000207403 141 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm22488-201ENSMUST00000116811 127 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm11859-201ENSMUST00000118099 455 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm11935-201ENSMUST00000118608 399 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Mir5624-201ENSMUST00000176635 61 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm24799-201ENSMUST00000178431 79 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm44429-201ENSMUST00000203542 186 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm44594-201ENSMUST00000208982 407 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Ddx56Q9D0R4 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm7853-201ENSMUST00000100708 478 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm24890-201ENSMUST00000104389 102 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm14881-201ENSMUST00000120366 372 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm14215-201ENSMUST00000120578 221 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm25625-201ENSMUST00000157221 96 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm22216-201ENSMUST00000157557 114 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm22945-201ENSMUST00000158557 157 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Mir6408-201ENSMUST00000183643 91 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm27905-201ENSMUST00000184005 207 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm28579-201ENSMUST00000186143 369 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm43746-201ENSMUST00000200028 317 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm44419-201ENSMUST00000203338 229 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm26265-201ENSMUST00000083277 135 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddx56Q9D0R4 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm9009-201ENSMUST00000117321 326 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm14971-201ENSMUST00000117980 663 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm12646-201ENSMUST00000119144 238 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm14761-201ENSMUST00000121363 262 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm14298-201ENSMUST00000139032 237 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm16356-201ENSMUST00000143300 169 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm26105-201ENSMUST00000157253 190 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm24314-201ENSMUST00000158274 123 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17522-201ENSMUST00000178144 498 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm22367-201ENSMUST00000178930 132 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm25457-201ENSMUST00000179509 107 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm44161-201ENSMUST00000203532 253 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm43932-201ENSMUST00000204499 52 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm2829-201ENSMUST00000213121 499 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm26329-201ENSMUST00000093723 110 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ddx56Q9D0R4 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Ddx56Q9D0R4 Gm12723-201ENSMUST00000120700 451 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm24730-201ENSMUST00000158228 117 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Snord11-201ENSMUST00000158468 84 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm20660-201ENSMUST00000177515 289 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm24618-201ENSMUST00000177718 94 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm23953-201ENSMUST00000178214 94 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm26297-201ENSMUST00000179464 132 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm26332-201ENSMUST00000179813 94 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm22863-201ENSMUST00000180265 94 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm27783-201ENSMUST00000183534 105 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm27753-201ENSMUST00000184742 203 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Trbv18-201ENSMUST00000194256 294 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm44373-201ENSMUST00000196112 169 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms