Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm12934-201ENSMUST00000119221 343 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm25280-201ENSMUST00000157269 101 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm22651-201ENSMUST00000157872 94 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm24192-201ENSMUST00000157978 145 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm22538-201ENSMUST00000158169 299 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm22435-201ENSMUST00000158552 128 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm25121-201ENSMUST00000179846 79 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm45403-201ENSMUST00000209453 276 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm19572-201ENSMUST00000214326 338 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm7065-201ENSMUST00000222150 474 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm650-201ENSMUST00000144428 1551 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm25526-201ENSMUST00000104332 132 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm15497-201ENSMUST00000119137 551 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm23980-201ENSMUST00000157135 158 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm25384-201ENSMUST00000157807 105 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm24846-201ENSMUST00000158033 108 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm22382-201ENSMUST00000158185 130 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm22527-201ENSMUST00000158816 106 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm5224-201ENSMUST00000183060 350 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm20885-201ENSMUST00000190192 654 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm18971-201ENSMUST00000197240 374 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Gm43286-201ENSMUST00000197420 424 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.44□□□□□ -2.02
Ddx28Q9CWT6 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm24582-201ENSMUST00000103967 103 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm24172-201ENSMUST00000104127 117 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm14843-201ENSMUST00000119596 212 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm14972-201ENSMUST00000121780 364 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm22491-201ENSMUST00000157190 102 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm24911-201ENSMUST00000157292 136 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm22654-201ENSMUST00000157874 105 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm24724-201ENSMUST00000158230 107 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm23024-201ENSMUST00000158770 292 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm23476-201ENSMUST00000158881 274 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm4468-201ENSMUST00000170206 294 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm23793-201ENSMUST00000179396 117 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm28661-201ENSMUST00000188231 681 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm43193-201ENSMUST00000197732 441 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm24623-201ENSMUST00000082616 194 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm23264-201ENSMUST00000083372 107 ntBASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
Ddx28Q9CWT6 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm22021-201ENSMUST00000104353 107 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm14624-201ENSMUST00000117746 192 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm12513-201ENSMUST00000118617 352 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm15211-201ENSMUST00000118932 528 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm23829-201ENSMUST00000157392 270 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm24499-201ENSMUST00000158446 104 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm25486-201ENSMUST00000158726 63 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm16232-201ENSMUST00000162856 167 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm7953-201ENSMUST00000168278 469 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm27505-201ENSMUST00000185071 110 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm37037-201ENSMUST00000194475 424 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm34015-201ENSMUST00000194908 451 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm43680-201ENSMUST00000199466 340 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm32222-201ENSMUST00000203296 298 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.42□□□□□ -2.02
Ddx28Q9CWT6 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms