Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm12934-201ENSMUST00000119221 343 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Trav20-201ENSMUST00000142754 347 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm23586-201ENSMUST00000157657 123 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm24858-201ENSMUST00000158058 323 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm24857-201ENSMUST00000158061 310 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm27490-201ENSMUST00000184754 128 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm37658-201ENSMUST00000192672 315 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm37119-201ENSMUST00000195691 389 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm42925-201ENSMUST00000197359 285 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Mir3068-202ENSMUST00000197755 79 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm44910-201ENSMUST00000208451 396 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Gm23097-201ENSMUST00000083448 105 ntBASIC2.3□□□□□ -2.04
Smc1aQ9CU62 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.3□□□□□ -2.04
Smc1aQ9CU62 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm23422-201ENSMUST00000102000 107 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm23202-201ENSMUST00000104376 129 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm14013-201ENSMUST00000119006 270 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Snord11-201ENSMUST00000158468 84 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm23813-201ENSMUST00000175153 77 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm38261-201ENSMUST00000192608 316 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm25788-201ENSMUST00000082721 131 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Gm23093-201ENSMUST00000083450 102 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Mir300-201ENSMUST00000083485 79 ntBASIC2.29□□□□□ -2.04
Smc1aQ9CU62 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
Smc1aQ9CU62 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm25377-201ENSMUST00000104334 129 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm15215-201ENSMUST00000117773 489 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm15281-201ENSMUST00000125181 351 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm15692-201ENSMUST00000152173 352 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm23381-201ENSMUST00000157676 94 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm25711-201ENSMUST00000158633 128 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm31123-201ENSMUST00000192094 666 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm45730-201ENSMUST00000212560 395 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm23246-201ENSMUST00000083371 67 ntBASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Smc1aQ9CU62 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.28□□□□□ -2.05
Smc1aQ9CU62 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm24098-201ENSMUST00000102075 109 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm25381-201ENSMUST00000102078 109 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm23010-201ENSMUST00000104151 126 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm12235-201ENSMUST00000118596 170 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm22668-201ENSMUST00000158716 260 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm22093-201ENSMUST00000158980 111 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm23862-201ENSMUST00000180342 94 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm27313-201ENSMUST00000183500 142 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm43529-201ENSMUST00000199178 412 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm25853-201ENSMUST00000082793 132 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm23377-201ENSMUST00000082943 126 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.27□□□□□ -2.05
Smc1aQ9CU62 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm7916-201ENSMUST00000120325 456 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm14551-201ENSMUST00000120802 256 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm23469-201ENSMUST00000157131 104 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm24237-201ENSMUST00000157790 132 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm25460-201ENSMUST00000157954 127 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm25488-201ENSMUST00000158728 118 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm37337-201ENSMUST00000192601 993 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm37579-201ENSMUST00000194291 142 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.26□□□□□ -2.05
Smc1aQ9CU62 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.26□□□□□ -2.05
Smc1aQ9CU62 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms