Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm14624-201ENSMUST00000117746 192 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm25460-201ENSMUST00000157954 127 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm27817-201ENSMUST00000184302 233 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm18185-201ENSMUST00000186725 667 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm29350-201ENSMUST00000189141 541 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm37923-201ENSMUST00000191624 161 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Snord43-201ENSMUST00000199549 108 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm44666-201ENSMUST00000208544 391 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm23462-201ENSMUST00000083264 104 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm25124-201ENSMUST00000083345 164 ntBASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc43Q9CR29 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm23551-201ENSMUST00000116852 121 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm25113-201ENSMUST00000157185 143 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm24358-201ENSMUST00000158424 288 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm23342-201ENSMUST00000158958 115 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Mir7016-201ENSMUST00000184308 72 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm27385-201ENSMUST00000184747 104 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm43676-201ENSMUST00000197532 540 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm43739-201ENSMUST00000198294 307 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm44881-201ENSMUST00000205425 367 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm2829-201ENSMUST00000213121 499 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm24412-201ENSMUST00000083426 109 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm26108-201ENSMUST00000083973 191 ntBASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc43Q9CR29 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm15536-201ENSMUST00000121411 114 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm23469-201ENSMUST00000157131 104 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm21827-201ENSMUST00000178247 423 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm27624-201ENSMUST00000185047 177 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm29134-201ENSMUST00000186579 126 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm28337-201ENSMUST00000190425 666 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm31123-201ENSMUST00000192094 666 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm44336-201ENSMUST00000203696 468 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm22978-201ENSMUST00000082607 160 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm25130-201ENSMUST00000082650 156 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Mir151-201ENSMUST00000083678 68 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Snora33-201ENSMUST00000093556 129 ntBASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Ccdc43Q9CR29 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm24098-201ENSMUST00000102075 109 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm25381-201ENSMUST00000102078 109 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Mir344e-201ENSMUST00000104677 66 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm15010-201ENSMUST00000117153 407 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm11786-201ENSMUST00000120799 155 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm15365-201ENSMUST00000122392 300 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm24780-201ENSMUST00000157635 143 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm25994-201ENSMUST00000175392 101 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm23523-201ENSMUST00000180190 107 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm37377-201ENSMUST00000191733 304 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm44446-201ENSMUST00000204864 255 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm45375-201ENSMUST00000210338 280 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm26175-201ENSMUST00000083794 131 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.21□□□□□ -2.06
Ccdc43Q9CR29 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm25094-201ENSMUST00000103992 131 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm12871-201ENSMUST00000118758 438 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm12926-201ENSMUST00000121158 409 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm26278-201ENSMUST00000157098 132 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Mir7j-201ENSMUST00000184427 122 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm28437-201ENSMUST00000190277 783 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 Gm43583-201ENSMUST00000199235 303 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.2□□□□□ -2.06
Ccdc43Q9CR29 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms