Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm25730-201ENSMUST00000178753 165 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Mir7683-201ENSMUST00000183842 61 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm8747-201ENSMUST00000195392 751 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm31230-201ENSMUST00000199725 785 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm44011-201ENSMUST00000203336 394 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm18453-201ENSMUST00000208000 626 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm22683-201ENSMUST00000082854 137 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm23462-201ENSMUST00000083264 104 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Mir322-201ENSMUST00000083484 95 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm13714-201ENSMUST00000117313 221 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm14713-201ENSMUST00000122362 686 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm24517-201ENSMUST00000122560 107 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm24262-201ENSMUST00000157431 144 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm22082-201ENSMUST00000157587 161 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm23641-201ENSMUST00000157857 101 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm25333-201ENSMUST00000158035 246 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm24518-201ENSMUST00000180275 94 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm18357-201ENSMUST00000188184 580 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm37709-201ENSMUST00000195074 600 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Use1Q9CQ56 Mir378a-201ENSMUST00000198300 66 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm2676-201ENSMUST00000207279 606 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm2829-201ENSMUST00000213121 499 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.54□□□□□ -2.16
Use1Q9CQ56 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm25404-201ENSMUST00000082970 107 ntBASIC1.54□□□□□ -2.16
Use1Q9CQ56 Gm23422-201ENSMUST00000102000 107 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm15365-201ENSMUST00000122392 300 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm23331-201ENSMUST00000157423 108 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Mir6351-201ENSMUST00000183826 99 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm28383-201ENSMUST00000187563 139 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm28474-201ENSMUST00000188501 315 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm29262-201ENSMUST00000190084 196 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.53□□□□□ -2.16
Use1Q9CQ56 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Ear14-201ENSMUST00000049559 468 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm26228-201ENSMUST00000082512 107 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm25080-201ENSMUST00000082526 107 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Snord7-201ENSMUST00000083781 97 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm25518-201ENSMUST00000083864 107 ntBASIC1.53□□□□□ -2.16
Use1Q9CQ56 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Use1Q9CQ56 Gm26377-201ENSMUST00000102184 108 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm14785-201ENSMUST00000120185 539 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm22264-201ENSMUST00000178200 107 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Mir6355-201ENSMUST00000183687 106 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm29550-201ENSMUST00000185543 285 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm28453-203ENSMUST00000187041 189 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Trbv7-201ENSMUST00000193339 402 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.52□□□□□ -2.17
Use1Q9CQ56 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Use1Q9CQ56 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm22315-201ENSMUST00000158010 143 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm9593-201ENSMUST00000166034 469 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm20477-201ENSMUST00000174028 280 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm27248-201ENSMUST00000184004 166 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm37727-201ENSMUST00000191637 819 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm44449-201ENSMUST00000203610 153 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm25853-201ENSMUST00000082793 132 ntBASIC1.51□□□□□ -2.17
Use1Q9CQ56 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Use1Q9CQ56 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm26396-201ENSMUST00000104093 132 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Mir190b-201ENSMUST00000104803 80 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm15010-201ENSMUST00000117153 407 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm24481-201ENSMUST00000157210 102 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Mir6997-201ENSMUST00000184313 71 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm27959-201ENSMUST00000185172 111 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms