| Hint3 | Q9CPS6 | Rny3-201 | ENSMUST00000083011 | 102 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Klra3-201 | ENSMUST00000088017 | 984 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | BC100530-201 | ENSMUST00000096089 | 619 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Vmn1r87-202 | ENSMUST00000211249 | 1835 nt | APPRIS P1 TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr165-202 | ENSMUST00000206110 | 1862 nt | APPRIS ALT1 TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr814-202 | ENSMUST00000213742 | 3798 nt | APPRIS P1 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23202-201 | ENSMUST00000104376 | 129 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23867-201 | ENSMUST00000122649 | 274 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm13625-201 | ENSMUST00000149283 | 480 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm16004-201 | ENSMUST00000161981 | 311 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23963-201 | ENSMUST00000179603 | 77 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm34073-201 | ENSMUST00000195736 | 212 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm42716-203 | ENSMUST00000197140 | 259 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Trav14-1-201 | ENSMUST00000198297 | 399 nt | APPRIS P1 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr717-ps1-201 | ENSMUST00000205589 | 556 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr1435-ps1-201 | ENSMUST00000207773 | 249 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC093316.2-201 | ENSMUST00000220015 | 172 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC157017.1-201 | ENSMUST00000220148 | 364 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm19118-201 | ENSMUST00000222554 | 98 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | CT010480.1-201 | ENSMUST00000223612 | 363 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm25579-201 | ENSMUST00000083407 | 106 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Snord7-201 | ENSMUST00000083781 | 97 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm13378-201 | ENSMUST00000117483 | 336 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm6806-201 | ENSMUST00000120092 | 1006 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Dnal1-203 | ENSMUST00000136159 | 403 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23169-201 | ENSMUST00000157157 | 112 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm22483-201 | ENSMUST00000157986 | 274 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm25863-201 | ENSMUST00000158249 | 329 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Ear-ps8-201 | ENSMUST00000161935 | 354 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm24813-201 | ENSMUST00000175310 | 84 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Mir3103-201 | ENSMUST00000175474 | 67 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm27588-201 | ENSMUST00000185096 | 263 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm28740-201 | ENSMUST00000186142 | 215 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Scgb1b1-ps-201 | ENSMUST00000189264 | 268 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm19261-201 | ENSMUST00000189628 | 539 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm10400-201 | ENSMUST00000203920 | 3835 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC164567.2-201 | ENSMUST00000219363 | 445 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm9318-201 | ENSMUST00000222444 | 438 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC154521.1-201 | ENSMUST00000222635 | 330 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23627-201 | ENSMUST00000082459 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm22502-201 | ENSMUST00000082488 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm22977-201 | ENSMUST00000082615 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm24149-201 | ENSMUST00000082757 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Snord104-201 | ENSMUST00000083192 | 70 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm25207-201 | ENSMUST00000093745 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm37566-201 | ENSMUST00000192363 | 4355 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Skint6-202 | ENSMUST00000171224 | 3723 nt | APPRIS P1 TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm12443-201 | ENSMUST00000122308 | 323 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm16355-201 | ENSMUST00000128606 | 231 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm25454-201 | ENSMUST00000157947 | 315 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Vmn2r-ps34-201 | ENSMUST00000177433 | 904 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm3852-201 | ENSMUST00000182781 | 264 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm27369-201 | ENSMUST00000185182 | 71 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm36953-201 | ENSMUST00000195295 | 268 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Trav5d-2-201 | ENSMUST00000196107 | 275 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm40040-202 | ENSMUST00000196337 | 305 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Trav5n-2-201 | ENSMUST00000197136 | 275 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm42425-201 | ENSMUST00000197756 | 565 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm34411-201 | ENSMUST00000201180 | 280 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr505-ps1-201 | ENSMUST00000207626 | 976 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm45375-201 | ENSMUST00000210338 | 280 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm45730-201 | ENSMUST00000212560 | 395 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr1035-ps1-202 | ENSMUST00000213364 | 288 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC158606.1-201 | ENSMUST00000220078 | 325 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC157352.1-201 | ENSMUST00000222762 | 303 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | CT025579.1-201 | ENSMUST00000223779 | 366 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Sval1-201 | ENSMUST00000031898 | 615 nt | APPRIS P1 TSL 1 (best) BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | mt-Co3-201 | ENSMUST00000082409 | 784 nt | APPRIS P1 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm10192-201 | ENSMUST00000086672 | 327 nt | APPRIS P1 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr1046-202 | ENSMUST00000213987 | 2770 nt | APPRIS P1 TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr24-203 | ENSMUST00000216754 | 4327 nt | APPRIS P1 TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Olfr1181-203 | ENSMUST00000213190 | 3934 nt | APPRIS P1 TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Crisp1-201 | ENSMUST00000026498 | 1416 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm1980-201 | ENSMUST00000123131 | 2306 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm25529-201 | ENSMUST00000104850 | 92 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm7164-201 | ENSMUST00000117503 | 450 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm13457-201 | ENSMUST00000117885 | 267 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm14287-201 | ENSMUST00000121060 | 117 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23980-201 | ENSMUST00000157135 | 158 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23557-201 | ENSMUST00000157820 | 138 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm22517-201 | ENSMUST00000158265 | 136 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm23005-201 | ENSMUST00000158950 | 136 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm9892-201 | ENSMUST00000182415 | 992 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Trav6-3-202 | ENSMUST00000183604 | 305 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Trav6d-3-202 | ENSMUST00000184883 | 308 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | 1700031L13Rik-204 | ENSMUST00000188072 | 812 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm44256-201 | ENSMUST00000203304 | 335 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Gm18453-201 | ENSMUST00000208000 | 626 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC126554.1-201 | ENSMUST00000222161 | 271 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | AC159619.2-201 | ENSMUST00000222924 | 401 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | 1700084M14Rik-201 | ENSMUST00000078832 | 559 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| Hint3 | Q9CPS6 | Vmn2r72-201 | ENSMUST00000063425 | 2571 nt | APPRIS P1 TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Rpl31-ps6-201 | ENSMUST00000119959 | 378 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Sval2-202 | ENSMUST00000119995 | 463 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Gm14269-201 | ENSMUST00000120455 | 306 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Gm24481-201 | ENSMUST00000157210 | 102 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Gm25384-201 | ENSMUST00000157807 | 105 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Gm24810-201 | ENSMUST00000175317 | 70 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Gm24304-201 | ENSMUST00000177635 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hint3 | Q9CPS6 | Esp4-201 | ENSMUST00000178498 | 553 nt | APPRIS P1 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |