Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm23273-201ENSMUST00000104058 135 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Mir872-201ENSMUST00000104728 81 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm13343-201ENSMUST00000116474 105 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm15613-201ENSMUST00000118396 326 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm25424-201ENSMUST00000157612 58 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm25369-201ENSMUST00000158848 132 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Snord92-201ENSMUST00000175548 85 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Mir6963-201ENSMUST00000183535 71 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm27580-201ENSMUST00000183666 149 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm42814-201ENSMUST00000199370 460 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm43604-201ENSMUST00000199799 705 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Mir21a-201ENSMUST00000083521 92 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Gm3956-201ENSMUST00000164882 2560 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Trim11Q99PQ2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim11Q99PQ2 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm22493-201ENSMUST00000104494 132 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Mdga2-203ENSMUST00000113942 423 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm22204-201ENSMUST00000122654 327 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm23257-201ENSMUST00000158322 132 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm26403-201ENSMUST00000158500 105 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm25380-201ENSMUST00000175463 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm24641-201ENSMUST00000178055 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm25484-201ENSMUST00000178217 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm26138-201ENSMUST00000179236 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm22821-201ENSMUST00000179288 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm37361-201ENSMUST00000194345 132 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm44337-201ENSMUST00000196553 114 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm23140-201ENSMUST00000082487 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm23298-201ENSMUST00000083181 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Snora31-201ENSMUST00000083213 130 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm24614-201ENSMUST00000083269 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm22057-201ENSMUST00000083387 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm25516-201ENSMUST00000083857 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm24449-201ENSMUST00000083985 106 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Gm23947-201ENSMUST00000093636 107 ntBASIC4.18□□□□□ -1.74
Trim11Q99PQ2 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm13432-201ENSMUST00000118861 241 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm25967-201ENSMUST00000157168 147 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm22225-201ENSMUST00000157358 278 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Mir713-201ENSMUST00000178651 108 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Mir6338-201ENSMUST00000183389 109 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm27445-201ENSMUST00000184484 72 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm29308-201ENSMUST00000188863 315 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm28537-201ENSMUST00000189026 315 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm29631-201ENSMUST00000191065 315 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm42988-201ENSMUST00000198116 225 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Gm3829-201ENSMUST00000222362 619 ntBASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim11Q99PQ2 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm24141-201ENSMUST00000122776 115 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Mir3620-201ENSMUST00000184710 61 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm37698-201ENSMUST00000192605 463 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm37791-201ENSMUST00000195081 286 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm40810-201ENSMUST00000219149 253 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Gm22304-201ENSMUST00000082688 129 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Snord15a-201ENSMUST00000083888 148 ntBASIC4.16□□□□□ -1.74
Trim11Q99PQ2 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim11Q99PQ2 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim11Q99PQ2 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm6762-201ENSMUST00000121769 289 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm5963-201ENSMUST00000143451 236 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm24916-201ENSMUST00000157287 79 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm25393-201ENSMUST00000157336 285 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm22883-201ENSMUST00000157376 106 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm23098-201ENSMUST00000157552 299 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Gm26219-201ENSMUST00000175216 71 ntBASIC4.15□□□□□ -1.75
Trim11Q99PQ2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms